Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent67 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1278600 bp
Thymine Count
1282802 bp
Guanine Count
1304037 bp
Cytosine Count
1310729 bp
Genome Length
5176376 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine/agmatine antiporter | EYX88_19400 | Not Available | Negative | 3844214 - 3845551 | 46845.3 |
| arac family transcriptional regulator | EYX88_19405 | Not Available | Negative | 3845688 - 3846449 | 29022.4 |
| arginine decarboxylase | EYX88_19410 | Not Available | Negative | 3846785 - 3849052 | 84499.9 |
| transcriptional regulator melr | EYX88_19415 | Not Available | Negative | 3849251 - 3850159 | 34929.9 |
| alpha-galactosidase | EYX88_19420 | Not Available | Positive | 3850442 - 3851797 | 50672.9 |
| melibiose:sodium transporter melb | EYX88_19425 | Not Available | Positive | 3851900 - 3853321 | 52551.4 |
| hypothetical protein | EYX88_19430 | Not Available | Negative | 3853276 - 3853455 | 6324.69 |
| duf2238 domain-containing protein | EYX88_19435 | Not Available | Negative | 3853460 - 3854089 | 23378.3 |
| class i fumarate hydratase | EYX88_19440 | Not Available | Negative | 3854212 - 3855858 | 60104.7 |
| anaerobic c4-dicarboxylate transporter | EYX88_19445 | Not Available | Negative | 3855936 - 3857276 | 47952.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





