Escherichia coli strain Broiler parent67

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent67 is a Gram-negative, rod-shaped bacterium known for its facultative anaerobic metabolism, which allows it to thrive in both aerobic and anaerobic environments. This strain exhibits mobility, facilitated by the presence of flagella, and typically arranges itself in singles and pairs. It has a mesophilic temperature range, with an optimal growth temperature of 37°C. E. coli strain Broiler parent67 is notably associated with a diverse array of hosts, including various mammals, birds, and even some plants. This extensive host range encompasses species such as Homo sapiens, Gallus gallus, Bos taurus, and others, highlighting its ecological versatility. The strain is free-living and possesses a single replicon and two membranes, characteristics common to many bacteria in the Enterobacteriaceae family. Health impacts attributed to this strain are significant and varied, including urinary tract infections (UTIs), gastrointestinal infections, and more severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). These health issues underscore the strain's pathogenic potential in humans and other animals. The ecological insight into E. coli strain Broiler parent67 reveals its role as both a commensal organism and a pathogen. Its presence in numerous hosts suggests a complex biotic relationship where it can contribute to both health and disease, depending on the context of the host's physiological state and environmental conditions. Understanding these dynamics is crucial for managing infections and preventing outbreaks associated with this strain.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent67

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent67
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent67

Gene Summary

Adenine Count

1278600 bp

Thymine Count

1282802 bp

Guanine Count

1304037 bp

Cytosine Count

1310729 bp

Genome Length

5176376 bp

Protein-coding Genes

4676 genes

Non-Coding Genes

368 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipoprotein signal peptidaseEYX88_15345Not AvailablePositive3025785 - 302627918129.3
fkbp-type peptidyl-prolyl cis-trans isomeraseEYX88_15350Not AvailablePositive3026367 - 302681616081.9
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseEYX88_15355Not AvailablePositive3026818 - 302776834776.6
ribonucleoside hydrolase rihcEYX88_15360Not AvailablePositive3027834 - 302874832669.8
4-hydroxy-tetrahydrodipicolinate reductaseEYX88_15365Not AvailablePositive3028915 - 302973628772.4
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunitEYX88_15370Not AvailablePositive3030192 - 303134041459.4
carbamoyl-phosphate synthase large subunitEYX88_15375Not AvailablePositive3031358 - 3034579117930.0
carnitine metabolism transcriptional regulator caifEYX88_15380Not AvailablePositive3034840 - 303523515363.0
carnitine operon protein caieEYX88_15385Not AvailableNegative3035355 - 303594521176.6
carnitinyl-coa dehydrataseEYX88_15390Not AvailableNegative3035951 - 303673628177.8

Displaying genes 3101 – 3110 of 5044 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total