Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent63 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1234128 bp
Thymine Count
1229076 bp
Guanine Count
1251067 bp
Cytosine Count
1264502 bp
Genome Length
4978888 bp
Protein-coding Genes
4518 genes
Non-Coding Genes
387 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii glutamine amidotransferase | EYX85_02290 | Not Available | Positive | 423852 - 424619 | 28580.1 |
| murein l,d-transpeptidase | EYX85_02295 | Not Available | Negative | 424590 - 425330 | 28022.8 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | EYX85_02300 | Not Available | Negative | 425486 - 425764 | 10861.2 |
| type ii toxin-antitoxin system antitoxin dinj | EYX85_02305 | Not Available | Negative | 425767 - 426027 | 9392.3 |
| nlpc/p60 family protein | EYX85_02310 | Not Available | Positive | 426213 - 426986 | 29819.7 |
| rep-associated tyrosine transposase rayt | EYX85_02315 | Not Available | Positive | 427162 - 427659 | 20068.9 |
| putative lateral flagellar export/assembly protein lafu | EYX85_02325 | Not Available | Positive | 429575 - 430345 | 28387.2 |
| dna polymerase iv | EYX85_02330 | Not Available | Positive | 430416 - 431471 | 39518.2 |
| type i toxin-antitoxin system antitoxin yafn | EYX85_02335 | Not Available | Positive | 431523 - 431816 | 11234.4 |
| type ii toxin-antitoxin system yafo family toxin | EYX85_02340 | Not Available | Positive | 431819 - 432217 | 15473.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





