Escherichia coli strain Broiler parent63

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent63 is a Gram-negative, rod-shaped bacterium characterized by its facultative anaerobic metabolism and mobility, facilitated by the presence of flagella. This strain is part of a broader ecological niche, primarily associated with various hosts, including Homo sapiens, Gallus gallus (chickens), and numerous other vertebrates and invertebrates. The optimal growth temperature for E. coli strain Broiler parent63 is 37°C, placing it within the mesophilic temperature range. This bacterium typically exists in pairs or singles and possesses a biotic relationship that allows it to be free-living, indicating its adaptability to different environments. It has a single replicon and is surrounded by two membranes, typical of Gram-negative organisms. This strain is particularly notable for its health effects on both humans and animals. It is linked to a wide array of pathogenic conditions, including urinary tract infections (UTIs), gastrointestinal infections, and severe diseases such as hemolytic uremic syndrome (HUS) and neonatal meningitis. The diversity of potential health impacts, including foodborne infections and colibacillosis, underscores the strain's significant role in both human and veterinary medicine. Understanding E. coli strain Broiler parent63's diverse host range and its pathogenic potential is crucial for addressing public health challenges. Its ability to inhabit various organisms and cause a spectrum of diseases highlights the importance of monitoring this strain in food safety and zoonotic disease prevention.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent63

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent63
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent63

Gene Summary

Adenine Count

1234128 bp

Thymine Count

1229076 bp

Guanine Count

1251067 bp

Cytosine Count

1264502 bp

Genome Length

4978888 bp

Protein-coding Genes

4518 genes

Non-Coding Genes

387 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinEYX85_05385Not AvailableNegative1053999 - 105429811490.6
Putative transcriptional repressorEYX85_05390Not AvailableNegative1054607 - 105519121917.9
Hypothetical proteinEYX85_05395Not AvailablePositive1055346 - 10555768869.63
Hypothetical proteinEYX85_05400Not AvailablePositive1055727 - 10559277723.26
Putative primosomal proteinEYX85_05405Not AvailablePositive1055943 - 105675830491.8
Putative replication protein pEYX85_05410Not AvailablePositive1056755 - 105754029599.4
Hypothetical proteinEYX85_05415Not AvailablePositive1057658 - 105800213127.9
Eae-like proteinEYX85_05420Not AvailablePositive1058064 - 105862720148.0
Hypothetical proteinEYX85_05425Not AvailablePositive1058624 - 105891411239.8
Hypothetical proteinEYX85_05430Not AvailablePositive1058911 - 105964526858.8

Displaying genes 41 – 50 of 4905 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total