Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent63 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1234128 bp
Thymine Count
1229076 bp
Guanine Count
1251067 bp
Cytosine Count
1264502 bp
Genome Length
4978888 bp
Protein-coding Genes
4518 genes
Non-Coding Genes
387 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yjdp | EYX85_18585 | Not Available | Negative | 3675371 - 3675700 | 13469.4 |
| bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase rpib | EYX85_18590 | Not Available | Negative | 3675769 - 3676218 | 16074.3 |
| als operon dna-binding transcriptional repressor alsr | EYX85_18595 | Not Available | Positive | 3676577 - 3677467 | 32378.2 |
| d-allose transporter substrate-binding protein | EYX85_18600 | Not Available | Positive | 3677526 - 3678461 | 32941.8 |
| d-allose import atp-binding protein alsa | EYX85_18605 | Not Available | Positive | 3678588 - 3680120 | 56748.3 |
| d-allose abc transporter permease | EYX85_18610 | Not Available | Positive | 3680099 - 3681079 | 34317.8 |
| d-allulose-6-phosphate 3-epimerase | EYX85_18615 | Not Available | Positive | 3681090 - 3681785 | 26110.7 |
| d-allose kinase | EYX85_18620 | Not Available | Positive | 3681769 - 3682698 | 33822.9 |
| is1 family transposase | EYX85_18625 | Not Available | Negative | 3682766 - 3682861 | 3625.4 |
| is1 family transposase | EYX85_18630 | Not Available | Positive | 3682862 - 3683039 | 6959.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





