Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent63 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1234128 bp
Thymine Count
1229076 bp
Guanine Count
1251067 bp
Cytosine Count
1264502 bp
Genome Length
4978888 bp
Protein-coding Genes
4518 genes
Non-Coding Genes
387 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcium/sodium antiporter | EYX85_15510 | Not Available | Positive | 3081300 - 3082277 | 34742.9 |
| arabinose-5-phosphate isomerase kdsd | EYX85_15515 | Not Available | Positive | 3082291 - 3083277 | 35198.3 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | EYX85_15520 | Not Available | Positive | 3083298 - 3083864 | 20016.3 |
| lps export abc transporter periplasmic protein lptc | EYX85_15525 | Not Available | Positive | 3083861 - 3084436 | 21735.9 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | EYX85_15530 | Not Available | Positive | 3084405 - 3084962 | 20128.1 |
| lps export abc transporter atp-binding protein | EYX85_15535 | Not Available | Positive | 3084969 - 3085694 | 26801.4 |
| rna polymerase factor sigma-54 | EYX85_15540 | Not Available | Positive | 3085742 - 3087175 | 53996.8 |
| ribosome hibernation promoting factor | EYX85_15545 | Not Available | Positive | 3087198 - 3087485 | 10750.9 |
| pts iia-like nitrogen regulatory protein ptsn | EYX85_15550 | Not Available | Positive | 3087603 - 3088094 | 17960.6 |
| rnase adapter rapz | EYX85_15555 | Not Available | Positive | 3088140 - 3088994 | 32494.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





