Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent63 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1234128 bp
Thymine Count
1229076 bp
Guanine Count
1251067 bp
Cytosine Count
1264502 bp
Genome Length
4978888 bp
Protein-coding Genes
4518 genes
Non-Coding Genes
387 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor nusg | EYX85_12925 | Not Available | Negative | 2602146 - 2602787 | 24525.8 |
| hypothetical protein | EYX85_12930 | Not Available | Positive | 2603047 - 2603304 | 9845.28 |
| positive regulator for repz translation | EYX85_12935 | Not Available | Positive | 2603412 - 2603501 | 3516.2 |
| incfii family plasmid replication initiator repa | EYX85_12940 | Not Available | Positive | 2603498 - 2604361 | 32932.8 |
| hypothetical protein | EYX85_12945 | Not Available | Positive | 2604411 - 2604683 | 9938.16 |
| hypothetical protein | EYX85_12950 | Not Available | Negative | 2604925 - 2605113 | 6734.21 |
| hypothetical protein | EYX85_12965 | Not Available | Positive | 2605531 - 2605800 | 10230.2 |
| proq/fino family protein | EYX85_12980 | Not Available | Negative | 2606292 - 2606891 | 22525.0 |
| hypothetical protein | EYX85_12985 | Not Available | Negative | 2607067 - 2607339 | 10371.7 |
| abc transporter atp-binding protein | EYX85_12995 | Not Available | Negative | 2607694 - 2609418 | 63417.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





