Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent62 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1243835 bp
Thymine Count
1246024 bp
Guanine Count
1275553 bp
Cytosine Count
1274694 bp
Genome Length
5040213 bp
Protein-coding Genes
4549 genes
Non-Coding Genes
347 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | EYX84_02440 | Not Available | Negative | 480464 - 483607 | 114714.0 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | EYX84_02445 | Not Available | Negative | 483619 - 484842 | 44336.4 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | EYX84_02450 | Not Available | Negative | 484858 - 485190 | 12279.9 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel cusc | EYX84_02455 | Not Available | Negative | 485214 - 486596 | 50714.9 |
| copper response regulator transcription factor cusr | EYX84_02460 | Not Available | Positive | 486753 - 487436 | 25428.2 |
| cu(+)/ag(+) sensor histidine kinase cuss | EYX84_02465 | Not Available | Positive | 487426 - 488874 | 54135.7 |
| type vi secretion system tip protein vgrg | EYX84_02470 | Not Available | Positive | 489611 - 491512 | 71384.0 |
| duf1795 domain-containing protein | EYX84_02475 | Not Available | Positive | 491540 - 492001 | 17319.4 |
| type iv secretion protein rhs | EYX84_02480 | Not Available | Positive | 492021 - 496820 | 178368.0 |
| hypothetical protein | EYX84_02485 | Not Available | Positive | 496822 - 497187 | 14505.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





