Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent62 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1243835 bp
Thymine Count
1246024 bp
Guanine Count
1275553 bp
Cytosine Count
1274694 bp
Genome Length
5040213 bp
Protein-coding Genes
4549 genes
Non-Coding Genes
347 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sel1 family tpr-like repeat protein ybeq | EYX84_02080 | Not Available | Positive | 406757 - 407734 | 37098.7 |
| zinc ribbon-containing protein | EYX84_02085 | Not Available | Negative | 407804 - 408286 | 18798.2 |
| leucine--trna ligase | EYX84_02090 | Not Available | Positive | 408521 - 411103 | 97241.0 |
| lps assembly lipoprotein lpte | EYX84_02095 | Not Available | Positive | 411118 - 411699 | 21357.8 |
| dna polymerase iii subunit delta | EYX84_02100 | Not Available | Positive | 411699 - 412730 | 38702.0 |
| nicotinate-nucleotide adenylyltransferase | EYX84_02105 | Not Available | Positive | 412732 - 413373 | 24529.3 |
| adenosylcobalamin/alpha-ribazole phosphatase | EYX84_02110 | Not Available | Positive | 413397 - 414008 | 23353.9 |
| ribosome silencing factor | EYX84_02115 | Not Available | Positive | 414268 - 414585 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EYX84_02120 | Not Available | Positive | 414589 - 415056 | 17342.1 |
| peptidoglycan dd-transpeptidase mrda | EYX84_02125 | Not Available | Positive | 415087 - 416988 | 70860.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





