Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent62 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1243835 bp
Thymine Count
1246024 bp
Guanine Count
1275553 bp
Cytosine Count
1274694 bp
Genome Length
5040213 bp
Protein-coding Genes
4549 genes
Non-Coding Genes
347 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a export atp-binding/permease msba | EYX84_23570 | Not Available | Negative | 4698135 - 4699883 | 64464.6 |
| comec family protein | EYX84_23575 | Not Available | Negative | 4699920 - 4702184 | 84661.1 |
| integration host factor subunit beta | EYX84_23580 | Not Available | Negative | 4702391 - 4702675 | 10651.8 |
| 30s ribosomal protein s1 | EYX84_23585 | Not Available | Negative | 4702835 - 4704508 | 61161.5 |
| (d)cmp kinase | EYX84_23590 | Not Available | Negative | 4704619 - 4705302 | 24747.8 |
| metalloprotease | EYX84_23595 | Not Available | Negative | 4705475 - 4706239 | 26768.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EYX84_23600 | Not Available | Negative | 4706408 - 4707691 | 46098.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EYX84_23605 | Not Available | Negative | 4707762 - 4708850 | 39842.6 |
| duf421 domain-containing protein | EYX84_23610 | Not Available | Negative | 4709049 - 4709741 | 26283.5 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | EYX84_23615 | Not Available | Positive | 4709871 - 4711631 | 65669.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





