Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent62 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1243835 bp
Thymine Count
1246024 bp
Guanine Count
1275553 bp
Cytosine Count
1274694 bp
Genome Length
5040213 bp
Protein-coding Genes
4549 genes
Non-Coding Genes
347 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin | EYX84_20850 | Not Available | Positive | 4168173 - 4168622 | 16257.0 |
| mfs transporter | EYX84_20855 | Not Available | Positive | 4169057 - 4170409 | 49145.0 |
| glucarate dehydratase | EYX84_20860 | Not Available | Positive | 4170411 - 4171751 | 48996.6 |
| glucarate dehydratase | EYX84_20865 | Not Available | Positive | 4171772 - 4173112 | 49174.9 |
| two-component sensor histidine kinase bara | EYX84_20870 | Not Available | Negative | 4173344 - 4176100 | 102460.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | EYX84_20875 | Not Available | Positive | 4176157 - 4177458 | 48122.3 |
| gtp diphosphokinase | EYX84_20880 | Not Available | Positive | 4177506 - 4179740 | 83908.5 |
| type ii toxin-antitoxin system antitoxin maze | EYX84_20885 | Not Available | Positive | 4179818 - 4180066 | 9356.24 |
| endoribonuclease mazf | EYX84_20890 | Not Available | Positive | 4180066 - 4180401 | 12158.8 |
| nucleoside triphosphate pyrophosphohydrolase | EYX84_20895 | Not Available | Positive | 4180472 - 4181263 | 30414.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





