Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent62 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1243835 bp
Thymine Count
1246024 bp
Guanine Count
1275553 bp
Cytosine Count
1274694 bp
Genome Length
5040213 bp
Protein-coding Genes
4549 genes
Non-Coding Genes
347 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme lyase ccmf/nrfe family subunit | EYX84_12670 | Not Available | Positive | 2538866 - 2540809 | 71409.6 |
| thiol:disulfide interchange protein dsbe | EYX84_12675 | Not Available | Positive | 2540806 - 2541363 | 20810.1 |
| cytochrome c-type biogenesis protein ccmh | EYX84_12680 | Not Available | Positive | 2541360 - 2542412 | 39122.3 |
| nitrate/nitrite response regulator protein narp | EYX84_12685 | Not Available | Negative | 2542447 - 2543094 | 23636.5 |
| hypothetical protein | EYX84_12695 | Not Available | Positive | 2546321 - 2547172 | 33369.9 |
| alpa family transcriptional regulator | EYX84_12700 | Not Available | Positive | 2547273 - 2547479 | 7834.5 |
| site-specific integrase | EYX84_12705 | Not Available | Positive | 2547802 - 2549007 | 46587.5 |
| site-specific integrase | EYX84_12710 | Not Available | Positive | 2549009 - 2550322 | 51444.7 |
| dna-binding protein | EYX84_12715 | Not Available | Positive | 2550319 - 2551950 | 62964.1 |
| hypothetical protein | EYX84_12720 | Not Available | Positive | 2551951 - 2552349 | 15258.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





