Escherichia coli strain Broiler parent61

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent61 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism. This strain is characterized by its ability to exist both in pairs and as singles, and it is motile due to the presence of flagella. E. coli Broiler parent61 thrives optimally at 37°C, positioning it within the mesophilic temperature range. This strain is notable for its diverse biotic relationships, being free-living and associated with a wide array of hosts, including Homo sapiens, Gallus gallus (chickens), Bos taurus (cattle), various mammals, birds, and even some plants like Solanum lycopersicum (tomatoes) and Brassica oleracea var. italica (broccoli). The extensive host range underscores the ecological versatility of E. coli Broiler parent61. Clinically, this strain is associated with a variety of health effects, particularly in humans. It is linked to urinary tract infections (UTIs), peritonitis, gastrointestinal infections, and more serious conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The strain’s pathogenicity in humans highlights its potential for causing significant health issues, particularly affecting vulnerable populations such as newborns. The presence of E. coli Broiler parent61 in diverse habitats and its association with serious health implications illustrate the complex interplay between microbial life and host health. Understanding such strains is crucial for managing infections and developing preventive measures in both human and veterinary medicine.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent61

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent61
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent61

Gene Summary

Adenine Count

1283196 bp

Thymine Count

1290166 bp

Guanine Count

1325971 bp

Cytosine Count

1303238 bp

Genome Length

5202636 bp

Protein-coding Genes

4674 genes

Non-Coding Genes

373 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hlyd family efflux transporter periplasmic adaptor subunitEYX83_00915Not AvailableNegative172815 - 17325216692.0
host specificity protein jEYX83_00920Not AvailableNegative173253 - 17360113147.7
tail fiber assembly proteinEYX83_00925Not AvailablePositive173712 - 1739067337.35
acetyltransferaseEYX83_00935Not AvailableNegative174133 - 17457616620.9
homoserine o-succinyltransferaseEYX83_00940Not AvailablePositive174733 - 17566235729.2
malate synthase aEYX83_00945Not AvailablePositive175931 - 17753260304.9
isocitrate lyaseEYX83_00950Not AvailablePositive177562 - 17886647524.1
bifunctional isocitrate dehydrogenase kinase/phosphataseEYX83_00955Not AvailablePositive179082 - 18080667181.8
glyoxylate bypass operon transcriptional repressor iclrEYX83_00960Not AvailableNegative180823 - 18164729722.1
methionine synthaseEYX83_00965Not AvailablePositive181847 - 185530136070.0

Displaying genes 521 – 530 of 5047 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total