Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EYX82_15015 | Not Available | Negative | 2957607 - 2959709 | 77327.0 |
| ynce family protein | EYX82_15020 | Not Available | Positive | 2959951 - 2961012 | 38658.2 |
| l-asparagine permease | EYX82_15025 | Not Available | Negative | 2961125 - 2962624 | 54236.3 |
| glutathione s-transferase | EYX82_15030 | Not Available | Positive | 2962837 - 2962956 | 4496.5 |
| type iv secretion protein rhs | EYX82_15035 | Not Available | Positive | 2963562 - 2964092 | 20023.7 |
| hypothetical protein | EYX82_15040 | Not Available | Positive | 2964089 - 2964445 | 13444.3 |
| type vi secretion system tip protein vgrg | EYX82_15045 | Not Available | Positive | 2964667 - 2966661 | 74133.4 |
| duf1795 domain-containing protein | EYX82_15050 | Not Available | Positive | 2966712 - 2967076 | 13882.6 |
| fadr family transcriptional regulator | EYX82_15055 | Not Available | Positive | 2967520 - 2968212 | 26135.7 |
| dha2 family efflux mfs transporter permease subunit | EYX82_15060 | Not Available | Positive | 2968235 - 2969662 | 51541.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





