Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3313 domain-containing protein | EYX82_14915 | Not Available | Positive | 2940851 - 2941519 | 24353.2 |
| bene family transporter ydco | EYX82_14920 | Not Available | Negative | 2941554 - 2942765 | 41956.6 |
| helix-turn-helix domain-containing protein | EYX82_14925 | Not Available | Positive | 2942818 - 2943354 | 19712.4 |
| 23s rrna 5-hydroxycytidine c2501 synthase | EYX82_14930 | Not Available | Positive | 2943427 - 2945388 | 72796.1 |
| duf2554 family protein | EYX82_14935 | Not Available | Negative | 2945480 - 2945710 | 8718.33 |
| type ii toxin-antitoxin system mrna interferase toxin hica | EYX82_14940 | Not Available | Positive | 2945932 - 2946108 | 6784.26 |
| type ii toxin-antitoxin system antitoxin hicb | EYX82_14945 | Not Available | Positive | 2946152 - 2946568 | 15220.4 |
| plp-dependent aminotransferase family protein | EYX82_14950 | Not Available | Positive | 2946647 - 2948053 | 52801.9 |
| abc transporter substrate-binding protein | EYX82_14955 | Not Available | Positive | 2948298 - 2949443 | 42294.4 |
| abc transporter atp-binding protein | EYX82_14960 | Not Available | Positive | 2949461 - 2950474 | 37069.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





