Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | EYX82_13750 | Not Available | Positive | 2749211 - 2749957 | 27280.6 |
| gntr family transcriptional regulator | EYX82_13755 | Not Available | Positive | 2750046 - 2750732 | 26589.7 |
| putative selenium delivery protein ydfz | EYX82_13760 | Not Available | Positive | 2750909 - 2751112 | 7276.83 |
| mannitol dehydrogenase family protein | EYX82_13765 | Not Available | Negative | 2751148 - 2752608 | 53761.4 |
| mfs transporter | EYX82_13770 | Not Available | Negative | 2752697 - 2753980 | 46269.9 |
| hypothetical protein | EYX82_13780 | Not Available | Positive | 2754585 - 2754698 | 4013.06 |
| cold shock protein ydfk | EYX82_13785 | Not Available | Positive | 2754767 - 2755000 | 8778.82 |
| recombinase family protein | EYX82_13790 | Not Available | Positive | 2755319 - 2755909 | 21821.5 |
| tail fiber assembly protein | EYX82_13795 | Not Available | Negative | 2755980 - 2756582 | 22490.3 |
| rhamnulose-1-phosphate aldolase | EYX82_13800 | Not Available | Positive | 2756900 - 2757724 | 30170.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





