Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kinase inhibitor | EYX82_13500 | Not Available | Positive | 2703533 - 2704009 | 17100.1 |
| arac family transcriptional regulator | EYX82_13520 | Not Available | Negative | 2705112 - 2705855 | 28160.9 |
| is1 family transposase | EYX82_13525 | Not Available | Negative | 2706077 - 2706182 | 4003.86 |
| acid stress response transcriptional regulator ydeo | EYX82_13535 | Not Available | Negative | 2707632 - 2708393 | 28918.1 |
| two-component system connector safa | EYX82_13540 | Not Available | Negative | 2708468 - 2708665 | 7328.15 |
| acid resistance putative oxidoreductase ydep | EYX82_13545 | Not Available | Negative | 2708913 - 2711192 | 83456.7 |
| fimbrial protein | EYX82_13550 | Not Available | Negative | 2711531 - 2712445 | 32058.4 |
| type 1 fimbrial protein | EYX82_13555 | Not Available | Negative | 2712505 - 2713008 | 18175.5 |
| type 1 fimbrial protein | EYX82_13560 | Not Available | Negative | 2713021 - 2713551 | 18935.6 |
| fimbrial biogenesis outer membrane usher protein | EYX82_13565 | Not Available | Negative | 2713565 - 2714713 | 41648.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





