Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pkhd-type hydroxylase ybix | EYX82_13345 | Not Available | Positive | 2672858 - 2673535 | 25514.2 |
| c4-type zinc finger protein ybii | EYX82_13350 | Not Available | Positive | 2673609 - 2673875 | 9804.42 |
| duf1471 domain-containing protein | EYX82_13355 | Not Available | Positive | 2674140 - 2674400 | 8568.2 |
| malate/lactate/ureidoglycolate dehydrogenase | EYX82_13360 | Not Available | Negative | 2674629 - 2675714 | 38929.4 |
| dna-binding protein ybib | EYX82_13365 | Not Available | Negative | 2675855 - 2676817 | 35082.7 |
| atp-dependent dna helicase ding | EYX82_13370 | Not Available | Negative | 2676845 - 2678995 | 81527.9 |
| atp-dependent rna helicase rhle | EYX82_13380 | Not Available | Negative | 2679532 - 2680893 | 49982.4 |
| dna-binding transcriptional regulator cecr | EYX82_13385 | Not Available | Positive | 2681122 - 2681793 | 24991.1 |
| secretion protein hlyd | EYX82_13390 | Not Available | Positive | 2681796 - 2682791 | 36287.7 |
| abc transporter atp-binding protein | EYX82_13395 | Not Available | Positive | 2682784 - 2684520 | 63167.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





