Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYX82_12815 | Not Available | Positive | 2554600 - 2556636 | 78917.4 |
| hypothetical protein | EYX82_12820 | Not Available | Negative | 2557035 - 2557214 | 6420.72 |
| hnh endonuclease | EYX82_12825 | Not Available | Negative | 2557259 - 2558131 | 33223.6 |
| hnh endonuclease | EYX82_12830 | Not Available | Positive | 2558268 - 2558918 | 24311.3 |
| sialate o-acetylesterase | EYX82_12835 | Not Available | Negative | 2558926 - 2559906 | 36708.7 |
| yjht family mutarotase | EYX82_12840 | Not Available | Negative | 2559971 - 2561077 | 39587.2 |
| n-acetylneuraminic acid outer membrane channel protein nanc | EYX82_12845 | Not Available | Negative | 2561097 - 2561813 | 27889.4 |
| type 1 fimbriae regulatory protein fimb | EYX82_12850 | Not Available | Positive | 2563269 - 2563871 | 23022.9 |
| type 1 fimbriae regulatory protein fime | EYX82_12855 | Not Available | Positive | 2564349 - 2564945 | 23131.7 |
| metal abc transporter substrate-binding lipoprotein/fibrin-binding adhesin fima | EYX82_12860 | Not Available | Positive | 2565427 - 2565975 | 18171.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





