Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol-phosphate transaminase | EYX82_12395 | Not Available | Negative | 2481664 - 2482734 | 39371.3 |
| histidinol dehydrogenase | EYX82_12400 | Not Available | Negative | 2482731 - 2484035 | 46137.9 |
| atp phosphoribosyltransferase | EYX82_12405 | Not Available | Negative | 2484041 - 2484940 | 33354.8 |
| his operon leader peptide | EYX82_12410 | Not Available | Negative | 2485086 - 2485136 | 2081.43 |
| yoeb-yefm toxin-antitoxin system antitoxin yefm | EYX82_12415 | Not Available | Positive | 2485419 - 2485670 | 9308.13 |
| txe/yoeb family addiction module toxin | EYX82_12420 | Not Available | Positive | 2485667 - 2485921 | 10216.1 |
| sdr family oxidoreductase | EYX82_12425 | Not Available | Positive | 2486004 - 2486828 | 29701.8 |
| lysr family transcriptional regulator | EYX82_12430 | Not Available | Positive | 2486874 - 2487803 | 34171.0 |
| membrane protein yoei | EYX82_12435 | Not Available | Positive | 2488018 - 2488080 | 2241.66 |
| putrescine/proton symporter plap | EYX82_12440 | Not Available | Positive | 2488070 - 2489428 | 49540.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





