Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine--trna ligase | EYX82_11940 | Not Available | Negative | 2379822 - 2381855 | 76334.9 |
| iron-sulfur cluster carrier protein apbc | EYX82_11945 | Not Available | Positive | 2381987 - 2383096 | 39940.4 |
| duf2574 family protein | EYX82_11950 | Not Available | Positive | 2383359 - 2383640 | 10178.1 |
| type 1 fimbrial protein | EYX82_11955 | Not Available | Positive | 2383933 - 2384475 | 19061.6 |
| fimbrial assembly protein | EYX82_11960 | Not Available | Positive | 2384556 - 2385230 | 24831.4 |
| fimbrial biogenesis outer membrane usher protein | EYX82_11965 | Not Available | Positive | 2385246 - 2387726 | 92294.2 |
| putative fimbrial-like adhesin protein | EYX82_11970 | Not Available | Positive | 2387742 - 2388776 | 36926.1 |
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | EYX82_11975 | Not Available | Negative | 2388858 - 2389196 | 12466.8 |
| nickel/cobalt efflux protein rcna | EYX82_11980 | Not Available | Negative | 2389415 - 2390239 | 30436.2 |
| ni(ii)/co(ii)-binding transcriptional repressor rcnr | EYX82_11985 | Not Available | Positive | 2390361 - 2390633 | 10091.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





