Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein ccmc | EYX82_11485 | Not Available | Positive | 2276699 - 2277436 | 27886.9 |
| heme exporter protein ccmd | EYX82_11490 | Not Available | Positive | 2277433 - 2277642 | 7745.59 |
| cytochrome c maturation protein ccme | EYX82_11495 | Not Available | Positive | 2277639 - 2278118 | 17699.4 |
| heme lyase ccmf/nrfe family subunit | EYX82_11500 | Not Available | Positive | 2278115 - 2280058 | 71420.6 |
| thiol:disulfide interchange protein dsbe | EYX82_11505 | Not Available | Positive | 2280055 - 2280612 | 20810.1 |
| cytochrome c-type biogenesis protein ccmh | EYX82_11510 | Not Available | Positive | 2280609 - 2281661 | 39065.2 |
| nitrate/nitrite response regulator protein narp | EYX82_11515 | Not Available | Negative | 2281696 - 2282343 | 23636.5 |
| autotransporter outer membrane beta-barrel domain-containing protein | EYX82_11520 | Not Available | Positive | 2282921 - 2283460 | 18927.8 |
| Trna-pro | Not Available | Not Available | Positive | 2283562 - 2283638 | Not Available |
| cardiolipin transport protein pbga | EYX82_11530 | Not Available | Negative | 2283713 - 2285473 | 67170.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





