Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase atos | EYX82_11385 | Not Available | Negative | 2251690 - 2253516 | 67784.1 |
| two-component system sensor histidine kinase rcsc | EYX82_11390 | Not Available | Positive | 2253683 - 2256532 | 106555.0 |
| transcriptional regulator rcsb | EYX82_11395 | Not Available | Negative | 2256732 - 2257382 | 23672.0 |
| phosphotransferase rcsd | EYX82_11400 | Not Available | Negative | 2257399 - 2260071 | 100382.0 |
| porin ompc | EYX82_11405 | Not Available | Positive | 2260811 - 2261938 | 41269.4 |
| fad:protein fmn transferase apbe | EYX82_11410 | Not Available | Positive | 2262050 - 2263105 | 38522.0 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | EYX82_11415 | Not Available | Positive | 2263179 - 2264243 | 39251.8 |
| dna oxidative demethylase alkb | EYX82_11420 | Not Available | Positive | 2264243 - 2264893 | 24076.9 |
| microcin j25 efflux abc transporter yoji | EYX82_11425 | Not Available | Positive | 2264969 - 2266612 | 61556.4 |
| malate dehydrogenase (quinone) | EYX82_11430 | Not Available | Positive | 2266830 - 2268476 | 60219.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





