Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | EYX82_11230 | Not Available | Negative | 2208512 - 2209651 | 41689.2 |
| histidine phosphatase family protein | EYX82_11235 | Not Available | Positive | 2209959 - 2210561 | 22360.9 |
| nucleoside triphosphatase nudi | EYX82_11240 | Not Available | Negative | 2210600 - 2211025 | 16370.7 |
| hypothetical protein | EYX82_11245 | Not Available | Positive | 2211304 - 2211846 | 18596.8 |
| nicotinamide mononucleotide deamidase-related protein yfay | EYX82_11250 | Not Available | Positive | 2211946 - 2213148 | 44256.3 |
| mfs transporter | EYX82_11260 | Not Available | Positive | 2213793 - 2214977 | 42182.3 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | EYX82_11265 | Not Available | Positive | 2214994 - 2215797 | 28912.7 |
| isncy family transposase | EYX82_11270 | Not Available | Negative | 2216024 - 2216983 | 37014.3 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | EYX82_11275 | Not Available | Negative | 2217177 - 2218367 | 44124.5 |
| glycerol-3-phosphate dehydrogenase subunit glpb | EYX82_11280 | Not Available | Negative | 2218364 - 2219623 | 45392.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





