Escherichia coli strain Broiler parent60

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent60 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism and possesses flagella, allowing for mobility. This strain is notably mesophilic, with an optimal growth temperature of 37°C. It is found in host-associated habitats and can exist in pairs or as single cells. E. coli Broiler parent60 has a diverse range of biotic relationships, being free-living and capable of infecting various hosts, including Homo sapiens, Gallus gallus, Bos taurus, and many others across different taxa. The strain is associated with numerous health effects, particularly in humans, where it is linked to urinary tract infections (UTIs), gastrointestinal infections, and more severe conditions such as neonatal meningitis and hemorrhagic colitis. This broad pathogenic potential underscores the strain's relevance in both clinical and agricultural settings. The strain has one replicon and two membranes, characteristics typical of Gram-negative bacteria. Its ability to cause a multitude of infections, including foodborne illnesses and septicemia, highlights its significance in public health. In an ecological context, E. coli Broiler parent60 exemplifies the complex interactions between microbial pathogens and their hosts, demonstrating how a single bacterial strain can impact a wide range of species and contribute to various health issues. This strain’s adaptability and pathogenicity emphasize the importance of monitoring E. coli populations in both clinical and agricultural environments to mitigate associated health risks.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent60

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent60
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent60

Gene Summary

Adenine Count

1277034 bp

Thymine Count

1276137 bp

Guanine Count

1313076 bp

Cytosine Count

1306487 bp

Genome Length

5172844 bp

Protein-coding Genes

4658 genes

Non-Coding Genes

393 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
esteraseEYX82_09935Not AvailableNegative1965228 - 196597727493.8
biofilm peroxide resistance protein bsmaEYX82_09940Not AvailablePositive1966159 - 196648812066.7
isovaleryl-coa dehydrogenaseEYX82_09950Not AvailableNegative1967019 - 196864460638.5
glutathionylspermidine synthase family proteinEYX82_09955Not AvailableNegative1968728 - 196989145008.9
duf1190 domain-containing proteinEYX82_09960Not AvailableNegative1969894 - 197053223449.1
duf350 domain-containing proteinEYX82_09965Not AvailableNegative1970542 - 197094014242.7
duf2491 family proteinEYX82_09970Not AvailableNegative1970958 - 197161725029.4
pspa/im30 family proteinEYX82_09975Not AvailableNegative1971667 - 197236525335.0
duf2170 family proteinEYX82_09980Not AvailableNegative1972384 - 197278514955.9
23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmbEYX82_09985Not AvailableNegative1972912 - 197364326558.3

Displaying genes 2161 – 2170 of 5051 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total