Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine--trna ligase | EYX82_09140 | Not Available | Negative | 1807903 - 1809420 | 57843.0 |
| dipeptide/tripeptide permease dtpc | EYX82_09145 | Not Available | Negative | 1809657 - 1811114 | 52969.7 |
| lysine decarboxylase cada | EYX82_09150 | Not Available | Negative | 1811173 - 1813320 | 81250.7 |
| cadaverine/lysine antiporter | EYX82_09155 | Not Available | Negative | 1813400 - 1814734 | 46667.8 |
| hypothetical protein | EYX82_09160 | Not Available | Positive | 1814961 - 1815209 | 9456.5 |
| cadc family transcriptional regulator | EYX82_09165 | Not Available | Negative | 1815100 - 1816638 | 57876.2 |
| eal domain-containing protein | EYX82_09175 | Not Available | Negative | 1817442 - 1818977 | 57602.9 |
| duf4942 domain-containing protein | EYX82_09180 | Not Available | Negative | 1819048 - 1819893 | 32519.0 |
| duf957 domain-containing protein | EYX82_09185 | Not Available | Negative | 1819978 - 1820175 | 7407.73 |
| duf2502 domain-containing protein | EYX82_09190 | Not Available | Negative | 1820417 - 1820713 | 11339.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





