Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate--protein phosphotransferase | EYX82_08635 | Not Available | Positive | 1699326 - 1701821 | 92131.5 |
| helix-turn-helix domain-containing protein | EYX82_08640 | Not Available | Negative | 1701824 - 1702681 | 32392.4 |
| response regulator transcription factor | EYX82_08645 | Not Available | Negative | 1702694 - 1703428 | 28722.6 |
| sensor histidine kinase | EYX82_08650 | Not Available | Negative | 1703443 - 1705140 | 62661.3 |
| alanine transaminase | EYX82_08655 | Not Available | Positive | 1705517 - 1706755 | 46174.8 |
| membrane protein ypdk | EYX82_08660 | Not Available | Negative | 1706820 - 1706891 | 2704.57 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | EYX82_08665 | Not Available | Negative | 1707247 - 1708167 | 35481.4 |
| duf2545 family protein | EYX82_08670 | Not Available | Positive | 1708520 - 1708762 | 8923.5 |
| hypothetical protein | EYX82_08675 | Not Available | Negative | 1708839 - 1709114 | 10196.5 |
| yfdx family protein | EYX82_08680 | Not Available | Positive | 1709410 - 1710042 | 22907.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





