Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ymce | EYX82_08035 | Not Available | Positive | 1601589 - 1601819 | 8727.65 |
| addiction module toxin, gnsa/gnsb family | EYX82_08040 | Not Available | Positive | 1601809 - 1601982 | 6575.99 |
| 4fe-4s binding protein | EYX82_08045 | Not Available | Negative | 1602031 - 1603104 | 40122.2 |
| tmao reductase system sensor histidine kinase/response regulator tors | EYX82_08050 | Not Available | Negative | 1603176 - 1605920 | 101003.0 |
| tmao reductase system periplasmic protein tort | EYX82_08055 | Not Available | Positive | 1606003 - 1607031 | 37926.9 |
| two-component system response regulator torr | EYX82_08060 | Not Available | Negative | 1607004 - 1607696 | 26244.9 |
| pentaheme c-type cytochrome torc | EYX82_08065 | Not Available | Positive | 1607826 - 1608998 | 43624.9 |
| trimethylamine-n-oxide reductase tora | EYX82_08070 | Not Available | Positive | 1608998 - 1611544 | 94661.4 |
| molecular chaperone tord | EYX82_08075 | Not Available | Positive | 1611541 - 1612140 | 22372.7 |
| iron-sulfur cluster carrier protein apbc | EYX82_08520 | Not Available | Negative | 1681130 - 1682230 | 39451.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





