Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 1 small subunit | EYX82_07935 | Not Available | Positive | 1582653 - 1583771 | 40683.6 |
| ni/fe-hydrogenase large subunit | EYX82_07940 | Not Available | Positive | 1583768 - 1585561 | 66271.1 |
| ni/fe-hydrogenase b-type cytochrome subunit | EYX82_07945 | Not Available | Positive | 1585580 - 1586287 | 27598.8 |
| hydrogenase 1 maturation protease | EYX82_07950 | Not Available | Positive | 1586284 - 1586871 | 21544.8 |
| hydrogenase-1 operon protein hyae | EYX82_07955 | Not Available | Positive | 1586868 - 1587266 | 14878.7 |
| hydrogenase expression/formation protein | EYX82_07960 | Not Available | Positive | 1587263 - 1588120 | 31309.3 |
| cytochrome bd-ii oxidase subunit 1 | EYX82_07965 | Not Available | Positive | 1588254 - 1589798 | 57996.3 |
| cytochrome d ubiquinol oxidase subunit ii | EYX82_07970 | Not Available | Positive | 1589810 - 1590946 | 42426.3 |
| cytochrome bd-ii oxidase subunit cbdx | EYX82_07975 | Not Available | Positive | 1590959 - 1591051 | 3597.68 |
| appa family phytase/histidine-type acid phosphatase | EYX82_07980 | Not Available | Positive | 1591131 - 1592429 | 47040.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





