Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase iv | EYX82_07885 | Not Available | Positive | 1574984 - 1577038 | 77937.4 |
| methylglyoxal synthase | EYX82_07890 | Not Available | Negative | 1577070 - 1577528 | 16919.6 |
| duf2057 family protein | EYX82_07895 | Not Available | Negative | 1577624 - 1578286 | 24595.5 |
| coa-binding protein | EYX82_07900 | Not Available | Positive | 1578459 - 1578872 | 14716.0 |
| heat shock protein hspq | EYX82_07905 | Not Available | Negative | 1578917 - 1579234 | 11779.9 |
| 23s rrna (cytosine(1962)-c(5))-methyltransferase rlmi | EYX82_07910 | Not Available | Negative | 1579292 - 1580482 | 44398.6 |
| acylphosphatase | EYX82_07915 | Not Available | Positive | 1580577 - 1580855 | 10258.3 |
| sulfurtransferase tuse | EYX82_07920 | Not Available | Negative | 1580852 - 1581181 | 12395.0 |
| ftsh protease modulator ycca | EYX82_07925 | Not Available | Negative | 1581273 - 1581932 | 23364.3 |
| Trna-ser | Not Available | Not Available | Positive | 1582139 - 1582226 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





