Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjbq family protein | EYX82_05365 | Not Available | Positive | 1062066 - 1062482 | 15656.8 |
| mmcq/yjbr family dna-binding protein | EYX82_05370 | Not Available | Positive | 1062486 - 1062842 | 13467.1 |
| excinuclease abc subunit uvra | EYX82_05375 | Not Available | Negative | 1062877 - 1065699 | 103874.0 |
| single-stranded dna-binding protein ssb1 | EYX82_05380 | Not Available | Positive | 1065954 - 1066490 | 18976.1 |
| hypothetical protein | EYX82_05385 | Not Available | Negative | 1066589 - 1066870 | 10304.0 |
| c-di-gmp phosphodiesterase pdec | EYX82_05390 | Not Available | Positive | 1067299 - 1068885 | 60658.4 |
| superoxide response transcriptional regulator soxs | EYX82_05395 | Not Available | Negative | 1068888 - 1069211 | 12911.6 |
| redox-sensitive transcriptional activator soxr | EYX82_05400 | Not Available | Positive | 1069297 - 1069761 | 17235.8 |
| ncs2 family permease | EYX82_05405 | Not Available | Positive | 1070307 - 1071656 | 45762.5 |
| na+/h+ antiporter | EYX82_05410 | Not Available | Positive | 1071807 - 1073456 | 60527.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





