Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277034 bp
Thymine Count
1276137 bp
Guanine Count
1313076 bp
Cytosine Count
1306487 bp
Genome Length
5172844 bp
Protein-coding Genes
4658 genes
Non-Coding Genes
393 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1398 domain-containing protein | EYX82_05100 | Not Available | Positive | 1006198 - 1006602 | 15828.0 |
| hypothetical protein | EYX82_05105 | Not Available | Positive | 1006655 - 1006765 | 4283.41 |
| acetyltransferase | EYX82_05115 | Not Available | Negative | 1007109 - 1007552 | 16620.9 |
| homoserine o-succinyltransferase | EYX82_05120 | Not Available | Positive | 1007709 - 1008638 | 35729.2 |
| malate synthase a | EYX82_05125 | Not Available | Positive | 1008907 - 1010508 | 60304.9 |
| isocitrate lyase | EYX82_05130 | Not Available | Positive | 1010538 - 1011842 | 47524.1 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | EYX82_05135 | Not Available | Positive | 1012058 - 1013782 | 67181.8 |
| glyoxylate bypass operon transcriptional repressor iclr | EYX82_05140 | Not Available | Negative | 1013799 - 1014623 | 29722.1 |
| methionine synthase | EYX82_05145 | Not Available | Positive | 1014823 - 1018506 | 136070.0 |
| na/pi cotransporter family protein | EYX82_05150 | Not Available | Positive | 1018726 - 1020357 | 59470.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





