Escherichia coli strain Broiler parent55

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent55 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in various environments. It is characterized by its mobility, which is facilitated by the presence of flagella. This strain is mesophilic, with an optimal growth temperature of 37°C. In terms of its cellular structure, Broiler parent55 has two membranes and a single replicon. This strain is host-associated, meaning it is commonly found in association with a wide range of hosts including Homo sapiens, Gallus gallus, Bos taurus, and various other animals and plants. This diverse host range highlights its ecological adaptability and potential role in different biological systems. E. coli Broiler parent55 is known for its pathogenicity in humans, contributing to a variety of health issues such as urinary tract infections (UTIs), gastrointestinal infections, peritonitis, and neonatal meningitis, among others. The strain's involvement in severe conditions like hemolytic uremic syndrome (HUS) and gastrointestinal disease underscores its significance in clinical microbiology. Ecologically, the broad host range of E. coli Broiler parent55 indicates its potential for transmission between species and environments, suggesting a role in both pathogenic and commensal relationships within various ecosystems. This adaptability may facilitate its persistence in different habitats, contributing to its prevalence in both agricultural and clinical settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent55

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent55
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent55

Gene Summary

Adenine Count

1188419 bp

Thymine Count

1195152 bp

Guanine Count

1240353 bp

Cytosine Count

1228362 bp

Genome Length

4852414 bp

Protein-coding Genes

4455 genes

Non-Coding Genes

248 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinEYX78_01805Not AvailablePositive376261 - 3764647409.08
Ogr/delta-like zinc finger family proteinEYX78_01810Not AvailableNegative376461 - 3767219676.38
Bacteriop2 gpd proteinEYX78_01815Not AvailableNegative376764 - 37787341225.8
Tail sheath family proteinEYX78_01820Not AvailablePositive378031 - 37921543623.5
Major tail tube proteinEYX78_01825Not AvailablePositive379215 - 37972718879.6
Tail e family proteinEYX78_01830Not AvailablePositive379783 - 38015713530.2
Trna-ser;Not AvailableNot AvailablePositive379891 - 379978Not Available
Gpe family tail proteinEYX78_01835Not AvailablePositive380166 - 3803215743.69
Tail tape measure proteinEYX78_01840Not AvailablePositive380308 - 38311599804.8
Tail proteinEYX78_01845Not AvailablePositive383128 - 38361618409.0

Displaying genes 11 – 20 of 4703 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total