Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein recn | EYX78_02135 | Not Available | Positive | 425856 - 427517 | 61387.1 |
| outer membrane protein assembly factor bame | EYX78_02140 | Not Available | Positive | 427666 - 428007 | 12302.8 |
| rnfh family protein | EYX78_02145 | Not Available | Negative | 428072 - 428362 | 10790.0 |
| type ii toxin-antitoxin system toxin rata | EYX78_02150 | Not Available | Negative | 428352 - 428828 | 17727.7 |
| ssra-binding protein smpb | EYX78_02155 | Not Available | Positive | 428960 - 429442 | 18270.1 |
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 429657 - 430019 | Not Available |
| hypothetical protein | EYX78_02165 | Not Available | Negative | 430021 - 430203 | 6415.82 |
| carbon starvation induced protein csid | EYX78_02170 | Not Available | Positive | 430702 - 431679 | 37397.6 |
| l-2-hydroxyglutarate oxidase | EYX78_02175 | Not Available | Positive | 431699 - 432967 | 46083.7 |
| nadp-dependent succinate-semialdehyde dehydrogenase | EYX78_02180 | Not Available | Positive | 432990 - 434438 | 51773.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





