Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-disulfide reductase dsbd | EYX78_20515 | Not Available | Positive | 4061287 - 4062984 | 61888.8 |
| transcriptional regulator | EYX78_20520 | Not Available | Positive | 4063021 - 4063596 | 21941.3 |
| Trna-phe | Not Available | Not Available | Positive | 4063703 - 4063778 | Not Available |
| cadc family transcriptional regulator | EYX78_20535 | Not Available | Positive | 4064395 - 4065933 | 57876.2 |
| hypothetical protein | EYX78_20540 | Not Available | Negative | 4065824 - 4066072 | 9456.5 |
| cadaverine/lysine antiporter | EYX78_20545 | Not Available | Positive | 4066299 - 4067633 | 46667.8 |
| lysine decarboxylase cada | EYX78_20550 | Not Available | Positive | 4067713 - 4069860 | 81250.7 |
| dipeptide/tripeptide permease dtpc | EYX78_20555 | Not Available | Positive | 4069919 - 4071376 | 52969.7 |
| lysine--trna ligase | EYX78_20560 | Not Available | Positive | 4071613 - 4073130 | 57843.0 |
| type v toxin-antitoxin system toxin ghot | EYX78_20565 | Not Available | Negative | 4073249 - 4073422 | 6555.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





