Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | EYX78_20115 | Not Available | Positive | 3989702 - 3990544 | 31037.2 |
| enoyl-coa hydratase/isomerase family protein | EYX78_20120 | Not Available | Positive | 3990554 - 3991330 | 28612.6 |
| acyl coa:acetate/3-ketoacid coa transferase | EYX78_20125 | Not Available | Positive | 3991340 - 3992881 | 55621.8 |
| fad-binding protein | EYX78_20130 | Not Available | Positive | 3992878 - 3994959 | 76078.5 |
| trap transporter small permease | EYX78_20135 | Not Available | Positive | 3994980 - 3995456 | 17484.3 |
| trap transporter large permease | EYX78_20140 | Not Available | Positive | 3995499 - 3996800 | 45888.4 |
| trap transporter substrate-binding protein | EYX78_20145 | Not Available | Positive | 3996853 - 3997824 | 35965.5 |
| hipa domain-containing protein | EYX78_20150 | Not Available | Negative | 3997881 - 3999149 | 47919.8 |
| xre family transcriptional regulator | EYX78_20155 | Not Available | Negative | 3999152 - 3999643 | 17602.4 |
| hypothetical protein | EYX78_20160 | Not Available | Positive | 3999737 - 3999934 | 7826.58 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





