Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | EYX78_19005 | Not Available | Positive | 3775309 - 3775767 | 17438.4 |
| smda family multidrug abc transporter permease/atp-binding protein | EYX78_19010 | Not Available | Positive | 3775797 - 3777569 | 66110.5 |
| smdb family multidrug efflux abc transporter permease/atp-binding protein | EYX78_19015 | Not Available | Positive | 3777562 - 3779343 | 65237.6 |
| p-ii family nitrogen regulator | EYX78_19020 | Not Available | Positive | 3779524 - 3779862 | 12259.9 |
| ammonium transporter amtb | EYX78_19025 | Not Available | Positive | 3779892 - 3781178 | 44388.3 |
| acyl-coa thioesterase ii | EYX78_19030 | Not Available | Negative | 3781227 - 3782087 | 31968.1 |
| hypothetical protein | EYX78_19035 | Not Available | Positive | 3782305 - 3782877 | 19439.3 |
| duf1428 domain-containing protein | EYX78_19050 | Not Available | Positive | 3783605 - 3783958 | 13318.9 |
| cyclic-guanylate-specific phosphodiesterase pdeb | EYX78_19055 | Not Available | Negative | 3784000 - 3785550 | 58799.8 |
| hypothetical protein | EYX78_19060 | Not Available | Negative | 3785714 - 3786184 | 18268.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





