Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid-partitioning protein sopa | EYX78_18015 | Not Available | Positive | 3574862 - 3576028 | 43690.6 |
| parb/repb/spo0j family plasmid partition protein | EYX78_18020 | Not Available | Positive | 3576028 - 3576999 | 35388.3 |
| omptin family outer membrane protease ompt | EYX78_18025 | Not Available | Positive | 3577386 - 3577889 | 19060.7 |
| methyltransferase | EYX78_18040 | Not Available | Positive | 3579750 - 3579872 | 4727.86 |
| integrase | EYX78_18045 | Not Available | Negative | 3579873 - 3579974 | 4095.05 |
| tail fiber assembly protein | EYX78_18050 | Not Available | Positive | 3579939 - 3580352 | 15554.1 |
| recombinase family protein | EYX78_18055 | Not Available | Negative | 3580450 - 3581040 | 21853.7 |
| cold shock protein ydfk | EYX78_18060 | Not Available | Negative | 3581357 - 3581590 | 8778.78 |
| hypothetical protein | EYX78_18065 | Not Available | Negative | 3581659 - 3581772 | 4013.06 |
| sam-dependent methyltransferase | EYX78_18070 | Not Available | Negative | 3582138 - 3582292 | 5657.83 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





