Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine endoprotease degp | EYX78_17815 | Not Available | Positive | 3532512 - 3533936 | 49357.3 |
| cdar family transcriptional regulator | EYX78_17820 | Not Available | Positive | 3534091 - 3535248 | 43660.1 |
| duf3461 family protein | EYX78_17825 | Not Available | Negative | 3535302 - 3535688 | 15097.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EYX78_17830 | Not Available | Negative | 3536003 - 3536827 | 29892.8 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | EYX78_17835 | Not Available | Negative | 3536858 - 3539530 | 102420.0 |
| type i methionyl aminopeptidase | EYX78_17840 | Not Available | Negative | 3539592 - 3540386 | 29332.5 |
| 30s ribosomal protein s2 | EYX78_17845 | Not Available | Positive | 3540754 - 3541479 | 26745.2 |
| elongation factor ts | EYX78_17850 | Not Available | Positive | 3541737 - 3542588 | 30438.8 |
| ump kinase | EYX78_17855 | Not Available | Positive | 3542735 - 3543460 | 25971.9 |
| ribosome recycling factor | EYX78_17860 | Not Available | Positive | 3543752 - 3544309 | 20639.7 |
Pathways
640 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





