Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zapd | EYX78_17510 | Not Available | Negative | 3463466 - 3464209 | 28309.3 |
| dephospho-coa kinase | EYX78_17515 | Not Available | Negative | 3464209 - 3464829 | 22619.0 |
| gmp reductase | EYX78_17520 | Not Available | Positive | 3465054 - 3466097 | 37370.9 |
| protein transport protein hofc | EYX78_17525 | Not Available | Negative | 3466132 - 3467334 | 44255.0 |
| type ii secretion system protein gspe | EYX78_17530 | Not Available | Negative | 3467324 - 3468709 | 50630.4 |
| prepilin peptidase-dependent pilin | EYX78_17535 | Not Available | Negative | 3468719 - 3469159 | 15621.7 |
| carboxylating nicotinate-nucleotide diphosphorylase | EYX78_17540 | Not Available | Negative | 3469363 - 3470256 | 32774.0 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | EYX78_17545 | Not Available | Positive | 3470344 - 3470895 | 20520.1 |
| beta-lactamase regulator ampe | EYX78_17550 | Not Available | Positive | 3470892 - 3471746 | 32150.9 |
| aromatic amino acid transporter arop | EYX78_17555 | Not Available | Negative | 3471789 - 3473159 | 49561.9 |
Pathways
527 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





