Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | EYX78_17310 | Not Available | Negative | 3419782 - 3421284 | 56106.2 |
| ribulokinase | EYX78_17315 | Not Available | Negative | 3421295 - 3422995 | 61228.8 |
| arabinose operon transcriptional regulator arac | EYX78_17320 | Not Available | Positive | 3423334 - 3424212 | 33385.8 |
| deda family protein | EYX78_17325 | Not Available | Positive | 3424298 - 3425062 | 28213.8 |
| thiamine abc transporter atp-binding protein thiq | EYX78_17330 | Not Available | Negative | 3425176 - 3425874 | 25051.7 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | EYX78_17335 | Not Available | Negative | 3425858 - 3427468 | 59434.6 |
| thiamine abc transporter substrate binding subunit | EYX78_17340 | Not Available | Negative | 3427444 - 3428427 | 36222.3 |
| hth-type transcriptional regulator sgrr | EYX78_17345 | Not Available | Negative | 3428591 - 3430246 | 64045.8 |
| glucose uptake inhibitor sgrt | EYX78_17350 | Not Available | Positive | 3430335 - 3430466 | 5382.47 |
| 3-isopropylmalate dehydratase small subunit | EYX78_17355 | Not Available | Negative | 3430574 - 3431179 | 22604.8 |
Pathways
849 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





