Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| co2+/mg2+ efflux protein apag | EYX78_17260 | Not Available | Negative | 3405567 - 3405944 | 13867.6 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | EYX78_17265 | Not Available | Negative | 3405947 - 3406768 | 30422.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | EYX78_17270 | Not Available | Negative | 3406765 - 3407754 | 35165.0 |
| peptidylprolyl isomerase sura | EYX78_17275 | Not Available | Negative | 3407754 - 3409040 | 47286.5 |
| lps assembly protein lptd | EYX78_17280 | Not Available | Negative | 3409093 - 3411447 | 89686.9 |
| co-chaperone djla | EYX78_17285 | Not Available | Positive | 3411702 - 3412517 | 30609.3 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | EYX78_17290 | Not Available | Negative | 3412635 - 3413294 | 24848.0 |
| rna polymerase-associated protein rapa | EYX78_17295 | Not Available | Negative | 3413306 - 3416212 | 109776.0 |
| dna polymerase ii | EYX78_17300 | Not Available | Negative | 3416376 - 3418727 | 90015.6 |
| l-ribulose-5-phosphate 4-epimerase | EYX78_17305 | Not Available | Negative | 3418802 - 3419497 | 25428.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





