Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhaa | EYX78_17105 | Not Available | Positive | 3372392 - 3373558 | 41332.2 |
| transcriptional activator nhar | EYX78_17110 | Not Available | Positive | 3373618 - 3374523 | 34293.2 |
| 30s ribosomal protein s20 | EYX78_17115 | Not Available | Negative | 3374619 - 3374882 | 9684.94 |
| duf2575 domain-containing protein | EYX78_17120 | Not Available | Positive | 3374985 - 3375203 | 7919.84 |
| bifunctional riboflavin kinase/fad synthetase | EYX78_17125 | Not Available | Positive | 3375211 - 3376152 | 34736.4 |
| isoleucine--trna ligase | EYX78_17130 | Not Available | Positive | 3376195 - 3379011 | 104360.0 |
| lipoprotein signal peptidase | EYX78_17135 | Not Available | Positive | 3379011 - 3379505 | 18129.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | EYX78_17140 | Not Available | Positive | 3379593 - 3380042 | 16081.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | EYX78_17145 | Not Available | Positive | 3380044 - 3380994 | 34776.6 |
| ribonucleoside hydrolase rihc | EYX78_17150 | Not Available | Positive | 3381060 - 3381974 | 32669.8 |
Pathways
899 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





