Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease subunit s | EYX78_16695 | Not Available | Negative | 3292759 - 3294132 | 51379.1 |
| type i restriction-modification system subunit m | EYX78_16700 | Not Available | Negative | 3294122 - 3295741 | 60590.9 |
| restriction endonuclease | EYX78_16705 | Not Available | Negative | 3295805 - 3296971 | 44246.1 |
| toxin-antitoxin system, antitoxin component | EYX78_16715 | Not Available | Positive | 3297284 - 3297586 | 11522.6 |
| gtpase | EYX78_16720 | Not Available | Negative | 3297620 - 3298576 | 35653.8 |
| ybdd/yjix family protein | EYX78_16725 | Not Available | Negative | 3298587 - 3298790 | 7729.24 |
| pyruvate/proton symporter btst | EYX78_16730 | Not Available | Negative | 3298840 - 3300990 | 77314.5 |
| amino acid deaminase | EYX78_16735 | Not Available | Negative | 3301258 - 3302478 | 44082.2 |
| d-aminoacylase | EYX78_16745 | Not Available | Positive | 3302679 - 3304121 | 52562.0 |
| rida family protein | EYX78_16750 | Not Available | Positive | 3304131 - 3304520 | 14070.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





