Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3343 domain-containing protein | EYX78_16645 | Not Available | Negative | 3280550 - 3280807 | 9554.6 |
| hypothetical protein | EYX78_16650 | Not Available | Negative | 3280804 - 3281571 | 27229.7 |
| 2-hydroxyacyl-coa dehydratase subunit d | EYX78_16655 | Not Available | Negative | 3281581 - 3282732 | 42772.2 |
| duf445 domain-containing protein | EYX78_16660 | Not Available | Negative | 3282848 - 3284128 | 48191.6 |
| multidrug efflux mfs transporter mdtm | EYX78_16665 | Not Available | Negative | 3284169 - 3285401 | 44551.0 |
| rpn family recombination-promoting nuclease/putative transposase | EYX78_16670 | Not Available | Positive | 3285868 - 3286812 | 36815.4 |
| plp-dependent aminotransferase family protein | EYX78_16675 | Not Available | Negative | 3287054 - 3288466 | 53033.7 |
| duf1127 domain-containing protein | EYX78_16680 | Not Available | Positive | 3288609 - 3288806 | 6964.17 |
| endoribonuclease syme | EYX78_16685 | Not Available | Negative | 3288848 - 3289186 | 12296.7 |
| type i restriction endonuclease subunit r | EYX78_16690 | Not Available | Negative | 3289401 - 3292664 | 124865.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





