Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | EYX78_16490 | Not Available | Positive | 3246858 - 3247436 | 22015.1 |
| nika protein | EYX78_16495 | Not Available | Negative | 3247644 - 3247967 | 12073.8 |
| rop family plasmid primer rna-binding protein | EYX78_16500 | Not Available | Positive | 3248240 - 3248434 | 7237.6 |
| dna helicase | EYX78_16505 | Not Available | Positive | 3248911 - 3252393 | 130772.0 |
| hnh endonuclease | EYX78_16510 | Not Available | Negative | 3252704 - 3253576 | 33092.5 |
| hnh endonuclease | EYX78_16515 | Not Available | Positive | 3253713 - 3254363 | 24272.2 |
| sialate o-acetylesterase | EYX78_16520 | Not Available | Negative | 3254371 - 3255351 | 36641.5 |
| yjht family mutarotase | EYX78_16525 | Not Available | Negative | 3255416 - 3256522 | 39634.3 |
| n-acetylneuraminic acid outer membrane channel protein nanc | EYX78_16530 | Not Available | Negative | 3256542 - 3257258 | 27889.4 |
| type 1 fimbriae regulatory protein fimb | EYX78_16535 | Not Available | Positive | 3258711 - 3259313 | 22994.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





