Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron/manganese abc transporter atp-binding protein sitb | EYX78_16430 | Not Available | Positive | 3238186 - 3239013 | 30152.6 |
| iron/manganese abc transporter permease subunit sitc | EYX78_16435 | Not Available | Positive | 3239010 - 3239867 | 30790.6 |
| iron/manganese abc transporter permease subunit sitd | EYX78_16440 | Not Available | Positive | 3239864 - 3240721 | 30727.9 |
| Trna-asp | Not Available | Not Available | Positive | 3241366 - 3241442 | Not Available |
| 2,5-didehydrogluconate reductase dkgb | EYX78_16460 | Not Available | Positive | 3241604 - 3242407 | 29453.4 |
| lysr family transcriptional regulator | EYX78_16465 | Not Available | Negative | 3242404 - 3243318 | 33738.7 |
| endonuclease/exonuclease/phosphatase family protein | EYX78_16470 | Not Available | Positive | 3243559 - 3244359 | 29993.4 |
| methyltransferase domain-containing protein | EYX78_16475 | Not Available | Positive | 3244436 - 3245206 | 28308.4 |
| is3 family transposase | EYX78_16480 | Not Available | Negative | 3245207 - 3245614 | 15556.3 |
| hypothetical protein | EYX78_16485 | Not Available | Negative | 3246006 - 3246461 | 17196.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





