Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit beta | EYX78_15160 | Not Available | Negative | 2985977 - 2986261 | 10651.8 |
| 30s ribosomal protein s1 | EYX78_15165 | Not Available | Negative | 2986421 - 2988094 | 61161.5 |
| (d)cmp kinase | EYX78_15170 | Not Available | Negative | 2988205 - 2988888 | 24747.8 |
| metalloprotease | EYX78_15175 | Not Available | Negative | 2989061 - 2989825 | 26778.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EYX78_15180 | Not Available | Negative | 2989995 - 2991278 | 46073.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EYX78_15185 | Not Available | Negative | 2991349 - 2992437 | 39773.4 |
| duf421 domain-containing protein | EYX78_15190 | Not Available | Negative | 2992636 - 2993328 | 26269.4 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | EYX78_15195 | Not Available | Positive | 2993458 - 2995218 | 65656.0 |
| formate transporter foca | EYX78_15200 | Not Available | Positive | 2995624 - 2996481 | 30992.6 |
| formate c-acetyltransferase | EYX78_15205 | Not Available | Positive | 2996536 - 2998818 | 85362.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





