Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein pilr | EYX78_14135 | Not Available | Positive | 2791643 - 2792740 | 41419.4 |
| pilus assembly protein pilx | EYX78_14140 | Not Available | Positive | 2792758 - 2793372 | 21267.3 |
| lytic transglycosylase domain-containing protein | EYX78_14145 | Not Available | Positive | 2793382 - 2793942 | 20760.4 |
| prepilin peptidase | EYX78_14150 | Not Available | Positive | 2793927 - 2794583 | 24636.8 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | EYX78_14155 | Not Available | Positive | 2794583 - 2795875 | 45762.8 |
| hypothetical protein | EYX78_14160 | Not Available | Negative | 2795872 - 2796120 | 8208.46 |
| shufflon protein b | EYX78_14165 | Not Available | Negative | 2796495 - 2796800 | 10901.8 |
| shufflon protein d' | EYX78_14170 | Not Available | Negative | 2796788 - 2797006 | 7988.18 |
| site-specific integrase | EYX78_14185 | Not Available | Positive | 2797140 - 2798234 | 42165.0 |
| transposase family protein | EYX78_14190 | Not Available | Negative | 2798315 - 2798545 | 8929.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





