Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1188419 bp
Thymine Count
1195152 bp
Guanine Count
1240353 bp
Cytosine Count
1228362 bp
Genome Length
4852414 bp
Protein-coding Genes
4455 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low affinity tryptophan permease tnab | EYX78_00285 | Not Available | Negative | 55996 - 57243 | 45257.3 |
| tryptophanase | EYX78_00290 | Not Available | Negative | 57335 - 58750 | 52822.5 |
| tryptophanase leader peptide | EYX78_00295 | Not Available | Negative | 58971 - 59045 | 2894.56 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | EYX78_00300 | Not Available | Negative | 59287 - 60651 | 49233.8 |
| membrane protein insertase yidc | EYX78_00305 | Not Available | Negative | 60757 - 62403 | 61543.5 |
| membrane protein insertion efficiency factor yidd | EYX78_00310 | Not Available | Negative | 62406 - 62663 | 9411.63 |
| ribonuclease p protein component | EYX78_00315 | Not Available | Negative | 62627 - 62986 | 13790.0 |
| 50s ribosomal protein l34 | EYX78_00320 | Not Available | Negative | 63003 - 63143 | 5380.74 |
| hypothetical protein | EYX78_00325 | Not Available | Negative | 63373 - 63453 | 3130.75 |
| chromosomal replication initiator protein dnaa | EYX78_00330 | Not Available | Positive | 63750 - 65153 | 52553.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





